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Trim beet tops and roots to 1 inch. Wash the beets thoroughly.
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Bring enough water to cover beets in a medium - large saucepan to a boil. Add beets and cook for 25 minutes. Drain the beets, let them cool, and discard cooking liquid.
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Slide the skins off and trim the tops and roots completely.
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Chop beets into small pieces OR slice into 1/4" slices.
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Combine and stir vinegar, water, salt, and sugar in a saucepan or kettle.
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Place cloves, cinnamon stick, and allspice into a makeshift cheesecloth bag. Tie with clean string. Add this bag to the vinegar mixture.
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Bring the vinegar mixture to a boil and simmer for 15 minutes. Then remove the spice bag.
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Pack beets and onions into prepared hot, sterilized jars. Leave about 1/2 inch headspace at the top.
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Pour pickling liquid over the beets and onions in the jars. Wipe each jar rim with clean cloth.
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Adjust jar lids and process in boiling water bath canner for approximately 35 minutes, or the correct time for your altitude. (see next step)
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Make sure you process for the amount of time appropriate for your altitude. Up to 1,000' = 30 minutes1,001 - 3,000' = 35 minutes3,001 - 6,000' = 40 minutesOver 6,000' = 45 minutes